x2 — Rate matrix on doublets constructed from
nucleotide rates
Usage
x2(submodel: CTMC<b>, a: Doublets<a>) → CTMC<Doublets<a>>
Arguments
-
submodel: -
Nucleotide rates
-
a: -
The Doublets alphabet
-
Default: The alphabet in the current context
Original default expressions
-
a -
get_state(alphabet)
Description
Rate matrix on doublets, constructed from a rate matrix on nucleotides.
Thus function can be used to build up doublet models incrementally.
Examples
F81 +> x2
GTR +> x2