NAME

path-graph - Compute a consensus alignment for the alignments given.

SYNOPSIS

path-graph [OPTIONS] < alignments-file

DESCRIPTION

Compute a consensus alignment for the alignments given.

ALLOWED OPTIONS:

-h, --help

produce help message

--alphabet arg

Specify the alphabet: DNA, RNA, Amino-Acids, Amino-Acids+stop, Triplets, Codons, or Codons+stop.

--taxa arg

Colon-separate pair of taxon names

--skip arg (=0)

number of tree samples to skip

--max-alignments arg (=1000)

maximum number of alignments to analyze

REPORTING BUGS:

BAli-Phy online help: http://www.bali-phy.org/docs.php.

Please send bug reports to bali-phy-users@googlegroups.com.