cut-range(1)

Benjamin Redelings

Feb 2018

NAME

cut-range - Select lines from multiple input files based on lines containing key = value.

SYNOPSIS

cut-range filename1.fastas [filename2.fastas ...] [OPTIONS]

DESCRIPTION

Select lines from multiple input files based on lines containing key = value.

ALL OPTIONS:

-h, --help
produce help message
--key arg (=iterations)
cut based on values of key=value
--skip arg
Minimum key value to retain, inclusive (an iteration number by default).
--until arg
Maximum key value to retain, inclusive.
--size arg
maximum number of samples to use
--verbose
Output more log messages on stderr.

EXAMPLES:

Select alignments after the first 100 iterations from two different runs:

% cut-range --skip=100 run-1/C1.P1.fastas run-2/C1.P1.fastas > P1.fastas

REPORTING BUGS:

BAli-Phy online help: http://www.bali-phy.org/docs.php.

Please send bug reports to bali-phy-users@googlegroups.com.