NAME

alignment-info -- Show useful statistics about the alignment.

SYNOPSIS

alignment-info alignment-file [tree-file] [OPTIONS]

DESCRIPTION

Show useful statistics about the alignment.

ALLOWED OPTIONS:

--help
produce help message
--align arg
file with sequences and initial alignment
--tree arg
file with initial tree
--alphabet arg
specify the alphabet: DNA, RNA, Amino-Acids, Triplets, or Codons

REPORTING BUGS:

BAli-Phy online help: http://www.bali-phy.org/docs.php.

Please send bug reports to bali-phy-users@googlegroups.com.